MinIntensity, MaxIntensity: Minimum and maximum of pixel intensity values.The MAD is defined as the median(|x i - median(x)|). StdIntensity, MADIntensity: Standard deviation and median absolute deviation (MAD) of pixel intensity values.MeanIntensity, MedianIntensity: Mean and median of pixel intensity values.TotalIntensity: Sum of all pixel intensity values.This 'maxmimum possible' value is defined by the 'Set intensity range from' setting in NamesAndTypes see the help for that setting for more details. Keep in mind that the default behavior in CellProfiler is to rescale the image intensity from 0 to 1 by dividing all pixels in the image by the maximum possible intensity value. Also, it is important to note whether you are reporting either the mean or the integrated intensity, so specify 'Mean intensity units' or 'Integrated intensity units' accordingly. Note that for publication purposes, the units of intensity from microscopy images are usually described as 'Intensity units' or 'Arbitrary intensity units' since microscopes are not calibrated to an absolute scale. If the image has a mask, only unmasked pixels will be measured. The user can measure all pixels in the image or can restrict the measurement to pixels within objects. This module will sum all pixel values to measure the total image intensity. Measure Image Intensity measures the total intensity in an image by summing all of the pixel intensities (excluding masked pixels).

Cellprofiler clip intensity